Hands On!


Calculate the IR spectrum of the isoprene molecule.
After you run the calculation, let's go for coffee and donuts, cause it takes around 5 minutes.
Connect into the server using ssh user@148.206.xxx.xx .
Create a new directory with the molecule's name
Download the files that are in the links above.
Check the input and pbs files.
Run the calculationa and wait!
[emma@pople]$ ssh usr@ip.adress


[emma@pople]$ usr@ip.adress password:


[usr@server]$ mkdir isoprene


[usr@server]$ ls


[usr@server]$ isoprene


[usr@server]$ cd isoprene


[usr@server]$ wget https://sinca.molphys.org/path

[usr@server]$ file.inp 100%[#####] in 0s

[usr@server]$ ls


[usr@server]$ isoprene.inp orca_4.2.0.pbs
[usr@server]$ vi isoprene.inp
[usr@server]$ vi orca_4.2.0.pbs
[usr@server]$ qsub orca_4.2.0.pbs




 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

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